Timeline


and

05/15/13:

17:56 Ticket #1875 (WebDAV uploader: do not show the proxy dialog upon incorrect password) created by dscho
Adrian Daerr (and Curtis Rueden, and Johannes Schindelin) reported that an …
17:51 Ticket #1874 (WebDAV uploader: Make sure that umlauts in passwords are handled properly) created by dscho
Adrian Daerr reported that a password with an umlaut does not get …
15:31 Ticket #1823 (Reinstate the contrib branches of fiji.sc) closed by dscho
fixed: I just fixed this, compiling a custom intermediary between Apache and …
13:46 Ticket #1873 (New legacy layer approach) created by bdezonia
The legacy layer relies on pixel harmonizers to synchronize data. Another …
13:42 Ticket #1872 (Cell Img types should act as virtual stacks in IJ1) created by bdezonia
We are making IJ2 sometimes load images as cell imgs of varying type. We …
13:37 Ticket #1871 (Change how binary data is checked and synchronized) created by bdezonia
The isBinary() code that is utilized in the legacy layer ir problematic: - …
10:33 SandBox edited by curtis
Put in some code formatting, for testing with CSS changes. (diff)

05/14/13:

16:48 Ticket #1867 (Uploading files with spaces does not work correctly) closed by dscho
fixed: Fixed in e18fd7dea19e620d79c45fb3762c76f1ad198e81.
14:56 Ticket #1870 (SCIFIO barfs on this PNG file) created by bdezonia
I'm on the scifiocells branches. The attached PNG, which opens fine in …
13:56 Ticket #1869 (Improve Compositing of SCIFIOCellImgs) created by hinerm
Currently all compositing by the DefaultDatasetView in IJ2 is through the …
13:44 Ticket #1868 (Take advantage of cell iteration order) created by hinerm
Currently, the DefaultDatasetView's use of an ARGBScreenImage (which is an …
11:11 Ticket #1867 (Uploading files with spaces does not work correctly) created by curtis
If you upload a file with a space in the name, the uploader incorrectly …

05/13/13:

17:03 Ticket #1866 (IJ2 true color ranges improperly initialized) created by aivar
DefaultDatasetView.initializeView autoscales each channel independently, …

05/12/13:

12:15 Ticket #1865 (Make backups of sites.imagej.net) closed by dscho
fixed: Just fixed:  http://jenkins.imagej.net/view/Backups/job/Backup-skynet/
12:14 Ticket #1865 (Make backups of sites.imagej.net) created by dscho
We should have a Jenkins job that backs up the personal update sites.
10:29 Ticket #1864 (Add a convenient UI to the updater to initialize a personal update site) created by dscho
Now that we offer personal update sites …
10:17 Ticket #1857 (Feature: sites.imagej.net) closed by dscho
fixed: Since all the children have been handled, this ticket is now officially …
10:16 Ticket #1860 (Add a Jenkins job for monitoring the disk usage on ...) closed by dscho
fixed: This job is now in place: …

05/11/13:

11:31 Ticket #1863 (Fix Jenkins' increasingly frequent "out of PermSpace" errors) closed by dscho
fixed: Inspired by …
10:42 Ticket #1863 (Fix Jenkins' increasingly frequent "out of PermSpace" errors) created by dscho
It seems that for some days (weeks?) Jenkins freezes at some stage, …

05/10/13:

15:41 Ticket #1859 (Extend Fiji Wiki's Special:ChangeUploadPassword to handle ...) closed by dscho
fixed: This was changed now. It requires an authenticated user now. Iff the user …
15:07 Ticket #1858 (Add the virtual host 'sites.imagej.net') closed by dscho
fixed: I did exactly that, copying large parts of the setup from test.imagej.net …
15:03 Ticket #1862 (Make skynet a restricted Jenkins node) closed by dscho
fixed: I added a new user, jenkins-node, made /var/jenkins/ its home, …
15:00 Ticket #1862 (Make skynet a restricted Jenkins node) created by dscho
To let Jenkins handle the backups, including reports when the backup …
13:14 Ticket #1861 (Update Imglib to use new histogram code) created by bdezonia
Find places in Imglib that are using all the other histogram …
12:58 Ticket #1860 (Add a Jenkins job for monitoring the disk usage on ...) created by dscho
For the moment, sites.imagej.net shares disk space with openspim.org, and …
12:56 Ticket #1859 (Extend Fiji Wiki's Special:ChangeUploadPassword to handle ...) created by dscho
Since we want to offer  http://sites.imagej.net/<username>/ personal update …
12:33 Ticket #1858 (Add the virtual host 'sites.imagej.net') created by dscho
The plan is to let all ImageJ users offer their macros, scripts and …
12:29 Ticket #1857 (Feature: sites.imagej.net) created by dscho
This feature ticket is the mother of all tickets related to offering …
11:44 Ticket #1041 (Make Histogram implement ImgLib2 interfaces) closed by bdezonia
fixed

05/08/13:

16:27 Ticket #1856 (A exit hack) created by bdezonia
In order to always exit safely even if plugin writers do not dispose their …
12:19 Ticket #1855 (HistogramPlot needs List, Copy, and Log command support) created by bdezonia
The HistogramPlot has a few buttons whose functionality is not yet …
12:13 Ticket #865 (Implement Histogram dialog functionality) closed by bdezonia
fixed: There are a few remaining tasks needed to finish this task. But they are …
12:05 Ticket #1854 (HistogramPlot limitations) created by bdezonia
The HistogramPlot plugin has its own UI code to support Swing and …
12:02 Ticket #1853 (Add a UI to start/stop shadowing files from another update site) created by dscho
The idea about "shadowing" is that all update sites listed in a specific …
11:42 Ticket #1852 (HistogramPlot keeps IJ2 from exiting) created by bdezonia
Open an image Run histogram plot command Exit program IJ2 never terminates …

05/07/13:

21:50 Ticket #1851 (Fix Fiji issues with sezpoz) closed by dscho
fixed: I deployed sezpoz-1.9-imagej via scijava-common's release-version.sh (and …
19:40 Ticket #1851 (Fix Fiji issues with sezpoz) created by dscho
Every since fiji-compat depends on scijava-common, there is a problem with …

05/06/13:

11:21 Ticket #1850 (GradientImage example has style issues) created by bdezonia
In the tutorial code we have a simple command example. It creates a …

04/30/13:

12:33 Ticket #1847 (Force the updater to ignore java3d .jar files) closed by dscho
fixed: Fixed in 5a6ffd08583555fe50a7d80c3fcf6133a40bcadd.
10:48 Ticket #1849 (Let bump-pom-scijava increase the major version number when appropriate) created by dscho
At the moment, bump-pom-scijava always increases the minor version number …

04/29/13:

18:08 Ticket #1848 (Java3D .jar files get copied to jars/) created by stephan.preibisch@…
Either MiniMaven or the imagej-maven-plugin copy the Java3D .jar files …
18:07 Ticket #1847 (Force the updater to ignore java3d .jar files) created by stephan.preibisch@…
There is either a problem with MiniMaven or the imagej-maven-plugin, …
13:40 Ticket #1846 (Fix missing tags in ImageJA) created by dscho
When we switched to building ImageJA via Jenkins, the tagging of releases …

04/27/13:

13:52 Ticket #1845 (Fix ImageJ 1.x mirror) closed by dscho
fixed: The advantage now, of course, is that we get all the files that are there, …
13:34 Ticket #1845 (Fix ImageJ 1.x mirror) created by dscho
Since we cannot use rsync, we set up a mirror script. To be nice, we tried …

04/26/13:

15:12 Ticket #1844 (MiniMaven no longer rebuilds projects completely when dependencies changes) created by dscho
It used to rebuild only the parts that changed unless any …
14:18 Ticket #1843 (Support headless mode in the legacy service) created by dscho
For better integration with Fiji, we need to support headless mode. …
02:36 Ticket #1842 (Parse Fiji's update site list in ''Manage update sites'') created by dscho
It would be more convenient for users to have a list with checkboxes …

04/25/13:

15:07 Ticket #1841 (File Save and Save As do not have default names) created by bdezonia
Create a new image and fill in the name/title field to something. Now do a …
14:58 Ticket #1811 (Image Duplicate should ask for name) closed by bdezonia
fixed: With commit f955d339386e85336d7343a94a4f63fe20d8660e there is now a name …
13:18 Ticket #1840 (Menu dispatching broken on graceful-exit branch) created by bdezonia
The graceful-exit branch was created to fix #1835. Menus are now updated …
13:12 Ticket #1835 (Application exit relies on hack) closed by bdezonia
fixed: Curtis, this code now works but the graceul-exit branch has a menu …
09:18 Ticket #1839 (Let the updater check for updates automatically only once within 24h) created by dscho
When starting Fiji/ImageJ multiple times a day, it can be distressing if …

04/24/13:

13:55 Ticket #1838 (Fix wiki.imagej.net) closed by dscho
fixed: I adjusted the httpd.include to have the line ServerAlias …
13:39 Ticket #1838 (Fix wiki.imagej.net) created by dscho
This domain still points at pacific... Two things needed: 1) adjust …
13:37 Ticket #1744 (Move fiji.sc to a better registrar) closed by dscho
wontfix: More and more I get the feeling that we cannot simply fix this. So let's …
11:10 Ticket #1837 (Fix the Stable-Fiji job) closed by dscho
fixed: I fixed this by making  http://update.imagej.net/bootstrap.js (which is the …
11:01 Ticket #1794 (Improve the Stable-Fiji job) closed by dscho
fixed: This was solved in a slightly different way, because the changes are *not* …

04/23/13:

17:49 Ticket #1837 (Fix the Stable-Fiji job) created by dscho
It only came to my attention today that the continuous Fiji releases are …
17:17 Ticket #1836 (LegacyService dispose code is fragile) created by bdezonia
The DefaultLegacyService dispose() method closes all windows before …

04/22/13:

14:37 Ticket #1616 (Legacy mode: gracefully handle closing IJ1 app frame) closed by bdezonia
fixed: I have opened a ticket for the closing issue (see #1835). Considering this …
14:35 Ticket #1835 (Application exit relies on hack) created by bdezonia
There is a hack in the QuitProgram plugin that invokes System.exit(0). …

04/19/13:

16:56 Ticket #1834 (Drag and Drop: minor drawing issue) created by bdezonia
Drag a LUT file from the Finder to the IJ2 app frame. The LUT opens in its …

04/18/13:

23:18 Ticket #1832 (Drag and Drop: support ObjectJ files) closed by curtis
wontfix: This is the sort of thing an ImageJ2 version of ObjectJ would need to …
18:06 Ticket #1755 (Let Fiji Wiki's Special:Incoming access the data uploaded via ImageJ2's ...) closed by dscho
fixed: Fixed by enhancing SpecialIncoming.php a little and adding configuration …
17:42 Ticket #1731 (Make sure Fiji infrastructure is properly backed up) closed by dscho
fixed: Luckily, rsync is only slow the first time. The Backup-fiji.sc job …
17:13 Ticket #853 (Drag and Drop should support all types IJ1 does) closed by bdezonia
duplicate: #1821 is the feature ticket of a number of drag and drop limitations. The …
17:11 Ticket #1833 (Drag and Drop: support .xls and .csv files) created by bdezonia
In IJ1 dragged and dropped .xls and .csv files open as results tables. …
17:07 Ticket #1832 (Drag and Drop: support ObjectJ files) created by bdezonia
In IJ1 if you drag and drop an .ojj file (or one containing ojj as 1st …
17:04 Ticket #1831 (Drag and Drop: handle .roi files) created by bdezonia
In IJ1 dropping a .roi file on an image causes the .roi file to be opened …
17:01 Ticket #1830 (Drag and Drop: install plugins) created by bdezonia
In IJ1 if you drag and drop a .jar or .class file onto the app frame the …
16:59 Ticket #1829 (Drag and Drop: open various kinds of text files) created by bdezonia
IJ1's drag and drop code opens the following files as text: .txt, .ijm, …
16:57 Ticket #1828 (Drag and Drop: open a directory as a stack of images) created by bdezonia
In IJ1 dropping a directory on the app frame can result in a image stack …
15:37 Ticket #1585 (Synchronize legacy data: OverlayManager <-> ROI Manager) reopened by bdezonia
12:45 Ticket #1827 (Fix updater's conflict resolution of local-only dependencies) created by dscho
When a local-only file was detected as a dependency of a plugin that is to …
10:37 Ticket #1826 (Phantom ROIs exist in ROIManager) created by bdezonia
When switching to legacy mode Overlays in the IJ2 OverlayManager end up as …
10:23 Ticket #1825 (Legacy mode always displays the RoiManager) created by bdezonia
Whenever you switch to legacy mode the ROIManager is displayed. Maybe we …
10:19 Ticket #1824 (Legacy mode not harmonizing everything) created by bdezonia
The legacy mode toggle code only handles image windows when switching …
10:09 Ticket #1617 (Legacy mode: can't use ROI Manager) closed by bdezonia
fixed: Fixed with commit 1be40c590d6e880122440c398b47f3a55515fca0

04/17/13:

13:24 Ticket #1823 (Reinstate the contrib branches of fiji.sc) created by dscho
We can no longer do it with SSH, of course, but we can allow people to …
11:18 Ticket #1822 (Add a command that allows easy image sharing between computers in the same ...) created by dscho
Many a time did I wish in workshops that I could easily make some files …
04:33 Ticket #1040 (Move Fiji's Help>Upload Sample Image to ImageJ2) closed by dscho
fixed: Uploaded.
04:19 Ticket #1737 (Make the Fiji update site read-write again) closed by dscho
fixed: So I wrote that Wiki extension over the past hours. It's a pity that the …

04/16/13:

17:02 Ticket #860 (Make a UI agnostic drag and drop facility) closed by curtis
fixed: With the [changeset:9f20b3ec6c297a356ec5da44d5ce85ff04327290 merger of the …
16:59 Ticket #1821 (Improve drag-and-drop [compatibility]) created by curtis
This ticket covers needed improvements to ImageJ's UI-agnostic …
16:56 Ticket #846 (Exception displayed when dropping unsupported file on application window) closed by curtis
fixed: In principle, this is fixed with the new …
16:51 Ticket #1677 (ImageDisplays should be DND targets) closed by curtis
fixed: Done in 58bc0fc8. Not …
16:50 Ticket #1675 (IOService enhancement needed for drag and drop) closed by curtis
fixed: Branch merged in [changeset:9f20b3ec6c297a356ec5da44d5ce85ff04327290

04/15/13:

18:23 Ticket #1820 (Improve histogram plot command) closed by bdezonia
fixed: Recent work allows Histogram Plot to work with multichannel data and also …
18:19 Ticket #1820 (Improve histogram plot command) created by bdezonia
The histogram plot command has limitations that need to be lifted. It only …
11:26 Ticket #1819 (Have an example OpenSPIM image to open and display in ImageJ2) created by dscho
To show-case the new and improved architecture of ImageJ2, we should use …
00:02 Ticket #1626 (Sezpoz error on Windows) closed by dscho
duplicate: This is a duplicate of ticket #1560.
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