Timeline


and

03/26/13:

17:11 Ticket #1755 (Let Fiji Wiki's Special:Incoming access the data uploaded via ImageJ2's ...) created by dscho
Another fall-out from pacific dying…
16:48 Ticket #1754 (Reconcile dependency versions between Fiji and ImageJ2) created by dscho
For example, Fiji still requires jsch-0.1.42.jar but ImageJ2 requires …
16:38 Ticket #1753 (Make the title bar display "ImageJ <version>" and Fiji's window title be ...) created by dscho
This is in preparation for the legacy mode to unconfuse users.
15:13 Ticket #1752 (Make sure that the Jenkins job uploading ImageJ 1.x to the ImageJ update ...) created by dscho
It might have been affected by the pacific meltdown.
14:44 Ticket #1751 (Make GitWeb work again on fiji.sc) created by dscho
Maybe even switch to CGit? Maybe even offer push support via  http:// for …
14:02 Ticket #1747 (Support for colorized grayscale images) closed by aivar
duplicate: Duplicate of extant #1379
13:47 Ticket #1750 (Linked histogram tools for derived images) created by aivar
SLIM Plugin has the concept of a set of derived or fitted images, such as …
13:30 Ticket #1749 (Improve interactibility of histogram) created by aivar
The histogram tool in SLIM Plugin allows user to drag min/max LUT …
13:25 Ticket #1748 (Incremental update when fitting derived images) created by aivar
The fitting process in SLIM Plugin is very slow so there is a scheme to …
13:22 Ticket #1747 (Support for colorized grayscale images) created by aivar
SLIM plugin takes two floating point value images and combines them: The …
13:18 Ticket #1746 (Concept of set of derived (i.e. fitted) images) created by aivar
In SLIM Plugin the fitting process takes an image with a Lifetime …
13:11 Ticket #1745 (Tuple support) created by aivar
Support image dimensions that hold different parameters describing the …
13:06 Ticket #773 (Reshaping via "Properties" sometimes crashes IJ display) closed by bdezonia
fixed
11:02 Ticket #1744 (Move fiji.sc to a better registrar) created by dscho
Currently, fiji.sc is registered with a German registrar that does not …
11:01 Ticket #1743 (Migrate cronjob scripts to Jenkins) created by dscho
Currently, backups on dev and skynet are performed via cronjobs. This is …
10:56 Ticket #1742 (Miscellaneous server admin stuff) created by dscho
This is a catch-all feature for all server admin stuff that does not fit …
10:41 Ticket #1741 (Move the IRC bot from pacific to fiji.sc) created by dscho
Since we should not rely on pacific, it would be better to have it on …
10:07 Ticket #1740 (Support Dropbox-backed update sites better) created by dscho
At the moment, Dropbox does not support HTTP HEAD requests. As a …
10:05 Ticket #1739 (Add a Git-backed uploader to support update sites on, say, GoogleCode) created by dscho
GoogleCode supports adding multiple repositories per project and browsing …
09:53 Ticket #1738 (Support 'unstable' update channels) created by dscho
This requires support in the uploading part to start shadowing (i.e. being …
09:49 Ticket #1737 (Make the Fiji update site read-write again) created by dscho
At the moment, the Fiji update site is read-only. This is due to a couple …
09:48 Ticket #1736 (Generalize the auto-installing of ij-updater-ssh) created by dscho
Now that we have a WebDAV backend, people will want to use it, but be …
09:38 Ticket #1735 (Make http://fiji.sc/<source-file> work again) created by dscho
The old website had a neat feature where it would automatically detect …
09:33 Ticket #1734 (Get http://fiji.sc/javadoc/ working again) created by dscho
We need to re-route the Jenkins job copying Fiji's javadocs to access the …

03/25/13:

17:56 Ticket #1733 (Make the Pacific-access-logs job work again) closed by dscho
fixed: We even keep the old logs via a precompiled access.log.big.old.gz, copied …
17:56 Ticket #1733 (Make the Pacific-access-logs job work again) created by dscho
This job is supposed to copy access.log files from pacific and run the …
15:18 Ticket #1732 (Teach the imagej-maven-plugin to copy locally-installed versions if they ...) created by dscho
At the moment, the imagej-maven-plugin always copies dependencies from the …
15:01 Ticket #1731 (Make sure Fiji infrastructure is properly backed up) created by dscho
Probably as a Jenkins job, we should make sure that fiji.sc things are …
14:54 Ticket #1730 (Change the Fiji-Wiki-Mirror Jenkins job to update fiji.lbl.gov & ...) created by dscho
Instead of mirroring pacific to server.microscopy (and doing a bad job on …
13:22 Ticket #1729 (Clean up after fiji.sc move to Madison [ndim-data]) created by dscho
This is a general feature ticket to be the mother of all the tickets …
12:43 Ticket #1728 (Clean up Jenkins jobs after fiji.sc meltdown and move to server) created by dscho
After pacific died and after we re-routed fiji.sc to mean server, we had …

03/22/13:

18:04 Ticket #1047 (Write scripts to manage IJ1 plugin testing) closed by dscho
wontfix: Actually, Curtis and/or Barry went through a lot of pain to make sure that …
18:03 Ticket #1727 (Add integration tests for the SSH and SFTP uploader backends of the ...) closed by dscho
fixed: Just like the WebDAV uploading support, I actually added this ticket when …
18:02 Ticket #1727 (Add integration tests for the SSH and SFTP uploader backends of the ...) created by dscho
Just like we verify that nothing got borked in the WebDAV support, we …
18:00 Ticket #1726 (Support WebDAV for uploading to an update site) closed by dscho
fixed: Even if I worked on this issue for about a week, I managed to open the …
17:57 Ticket #1726 (Support WebDAV for uploading to an update site) created by dscho
Not every scientist has the luxury of their own server, or at least they …
17:50 Ticket #1085 (Build & deploy the ImageJ Launcher only when the relevant source code ...) closed by dscho
fixed: I just solved this (and verified it by adding the icon from …
17:49 Ticket #1722 (Fix misc. build system issues) closed by dscho
duplicate: Duplicate of ticket #1723.
15:37 Ticket #989 (Make a useful Migration Guide for ImgLib1 -> ImgLib2) closed by dscho
wontfix: I fear we have to close this without any improvement. New developers …
11:38 Ticket #991 (Mavenize Fiji) closed by dscho
fixed: At long last, with all the plugins and libraries being Mavenized, …
11:37 Ticket #1725 (Use maven-release-plugin for ImageJ releases) created by curtis
It would be ideal to use the maven-release-plugin for our ImageJ releases, …

03/21/13:

13:17 Ticket #1724 (File Revert has limitations) created by bdezonia
File Revert reverts an image to it's original state if and only if it has …
12:03 Ticket #1723 (Fix misc. build system issues) created by bdezonia
12:01 Ticket #1722 (Fix misc. build system issues) created by bdezonia
11:56 Ticket #1721 (Settle long term display issues) created by bdezonia
11:31 Ticket #1720 (Development (web) infrastructure needs) created by bdezonia
11:27 Ticket #1719 (Robust testing system) created by bdezonia
11:06 Ticket #1718 (Expand use of Maven when possible) created by bdezonia
10:20 Ticket #1717 (Add a weekly full mirror to the Fiji mirror job) created by dscho
So far, Jenkins does a good job of keeping an incremental mirror of …

03/20/13:

12:00 Ticket #1716 (Legacy support related tickets) created by bdezonia
See blocking tickets
11:57 Ticket #1715 (Updater related tickets) created by bdezonia
See blocking tickets
11:55 Ticket #1714 (Minimaven related tickets) created by bdezonia
See blocking tickets
11:48 Ticket #1713 (Table related tickets) created by bdezonia
See blocking tickets
11:38 Ticket #1712 (SCIFIO changes needed) created by bdezonia
See blocking tickets
11:32 Ticket #1711 (Development infrastructure changes needed) created by bdezonia
See blocking tickets for details
11:27 Ticket #1710 (Enhance Imglib) created by bdezonia
See blocking tickets for details.
11:18 Ticket #1709 (Update plugins spreadsheet) created by bdezonia
For a previous beta release we tested al IJ1 commands in IJ2 and recorded …
10:54 Ticket #1708 (Tiff writing/reading should support metadata) created by bdezonia
Certain image metadata does not make the roundtrip from save to disk to …
10:39 Ticket #1707 (It should be easier to migrate tickets) created by bdezonia
Whenever betas roll around we find ourselves doing a lot of trac work. It …

03/19/13:

16:12 Ticket #1706 (Preferences for Multiple Instances, Applications, and Versions) created by gharris
Regarding Preferences support for Multiple Instances, Applications, and …
16:02 Ticket #1335 (Cropping results in exception and does not change data) closed by curtis
fixed: It seems a bit dangerous for an Overlay to support the getExtents()
15:00 Ticket #1405 (Newly created image Properties for pixel width and height is NaN) closed by bdezonia
fixed: Thanks to hinerm physical pixel sizes are now saved to disk. See imglib …
14:40 Ticket #1705 (Improve website resources [ndim-data]) created by curtis
This ticket is for improvements to ImageJ website resources slated for the …
14:39 Ticket #1704 (1-bit images (and some other pixel typed images) cannot be saved) created by bdezonia
Create new 1-bit Image. Verify it can save. Now create a new 8-bit image …
14:31 Ticket #1703 (Automatic binary image conversion can be unexpected) created by bdezonia
Create a new 8-bit unsigned image filling with either White or Black only. …
14:28 Ticket #1702 (Make pixel types extensible) created by curtis
We need a new type of plugin, PixelType, that wraps an ImgLib2 Type. This …
14:23 Ticket #1701 (Ensure multiple simultaneous widget panes work) created by curtis
I am fairly certain that multiple simultaneous widget panes, as things …
13:33 Ticket #975 (Red X appears initially in new image windows) closed by curtis
fixed: This problem does not occur anymore. The behavior is still not perfect …
13:19 Ticket #1700 (Unify ImageJ web sites) created by curtis
There are multiple overlapping subdomains right now: mirror.imagej.net, …
13:09 Ticket #1699 (Reconcile SwingDialog & SwingDialogPrompt) created by curtis
SwingDialog implements Dialog<JOptionPane> which extends UIComponent. It …
13:07 Ticket #1698 (Rename widget class hierarchy) created by curtis
InputWidget -> Widget InputPanel -> WidgetPanel AbstractInputWidget -> …
12:34 Ticket #1606 (Access ObjectService in a thread safe manner) closed by bdezonia
fixed: Tested and it appears to be fixed.
11:36 Ticket #1694 (Exception when exiting ImageJ2) closed by bdezonia
fixed: Fixed with commit b7d201a74abb915fa0d4f5ffc296dad79d6ed188
11:07 Ticket #1357 (Improve plugin infrastructure [ndim-data]) closed by curtis
fixed: All blocking tickets finished, pushed or reorganized. This feature is …
11:06 Ticket #1697 (Improve widgets [compatibility]) created by curtis
This ticket is for improvements to the UI widget infrastructure slated for …
11:05 Ticket #1691 (Pull threshold code out of core commands) closed by bdezonia
fixed: ThresholdService already existed. Enhanced with commit …
11:03 Ticket #1696 (Improve plugin infrastructure [compatibility]) created by curtis
This ticket is for improvements to the plugin infrastructure slated for …
10:48 Ticket #1538 (Eliminate type confusion in PluginInfo and CommandInfo) closed by curtis
fixed: This was [changeset:25e9d14c01d42f4d3bbdff82cd6de3bf5d73131e merged to …
10:34 Ticket #707 (Non-Modal Plugin) closed by curtis
fixed: Fair enough, we have non-modal commands now, so closing this ticket. But …
10:06 Ticket #1690 (Pull calculator code out of core commands) closed by bdezonia
fixed

03/15/13:

14:35 Ticket #1220 (DefaultImageDisplay::onEvent(DataUpdatedEvent ev) is inconsistent) closed by bdezonia
fixed: Fixed with commit 4d988ceefbff99e799b3c0e281b69d02639a3a52
14:32 Ticket #1695 (Thresholding composite image does not draw well) created by bdezonia
Run the threshold plugin on organ of corti. The threshold always displays …
14:30 Ticket #1694 (Exception when exiting ImageJ2) created by bdezonia
If you have two or more images open in IJ2 and you exit the program you …
13:05 Ticket #1693 (Integrate well with CellProfiler) created by bdezonia
For mid-May beta we want to make sure that the ImageJ2/CellProfiler …
11:50 Ticket #1692 (Add an auto-run facility to Fiji (forward-compatible with ImageJ2)) created by dscho
As discussed on IRC …
10:48 Ticket #1691 (Pull threshold code out of core commands) created by bdezonia
From a chat with ctrueden: Another thing you could work on is pushing the …
10:46 Ticket #1690 (Pull calculator code out of core commands) created by bdezonia
From a chat with ctrueden: Another thing you could work on is pushing the …
10:43 Ticket #1689 (Fix interactive plugin code) created by bdezonia
From a chat session with ctrueden: bdezonia: Regarding what to work on …

03/14/13:

11:13 Ticket #1688 (Make histogram update live in threshold plugin) created by bdezonia
This might be unnecessary. But maybe we want the threshold plugin to …
11:08 Ticket #1687 (Threshold min/max values should use sliders) created by bdezonia
The min and max values in the threshold dialog use spinners. Ideally they …
11:05 Ticket #1686 (Threshold plugin needs better histogram calculation) created by bdezonia
The Threshold plugin has its own histogram calculation code. Currently the …
10:59 Ticket #1685 (Threshold application data type might be wrong) created by bdezonia
When you select the Apply button in the Threshold plugin the pixels are …
10:54 Ticket #1684 (Threshold dialog exhibits roundoff errs) created by bdezonia
The min and max values in the threshold dialog can be manipulated with the …
10:50 Ticket #1683 (Threshold plugin is not a singleton) created by bdezonia
In IJ1 there is only one threshold plugin open and changing from window to …
10:46 Ticket #1682 (Threshold overlay may overdraw other overlays) created by bdezonia
The threshold overlay may draw over top of other overlays. It may need to …
10:43 Ticket #1681 (The threshold overlay can only be selected in the overlay manager) created by bdezonia
The threshold overlay, when it exists, can only be selected in the overlay …
10:41 Ticket #1680 (Threshold dialog needs to display histogram) created by bdezonia
The Image > Adjust > Threshold plugin does not yet show a histogram of the …
10:38 Ticket #1679 (Threshold can have a gridded look) created by bdezonia
If you open boats, threshold it, and then zoom to 3/2 X (i.e. 150 %) the …
10:35 Ticket #1678 (Threshold issues) created by bdezonia
The thresholding capabilities of ImageJ have some loose ends that need to …
10:27 Ticket #1677 (ImageDisplays should be DND targets) created by bdezonia
ImageDisplays should be drag and drop targets. For instance one should be …
10:21 Ticket #1676 (Improve drag and drop) created by bdezonia
10:15 Ticket #1675 (IOService enhancement needed for drag and drop) created by bdezonia
The drag and drop code (on drag-and-drop branch) treats all Files …
10:00 Ticket #1674 (Drag And Drop should score translations) created by bdezonia
On the drag-and-drop branch there is code for supporting drag and drop in …

03/13/13:

15:01 Ticket #1673 (Support tabular data in drag and drop) created by bdezonia
Right now (drag-and-drop branch) if you drag a set of table cell data from …

03/07/13:

13:36 Ticket #1672 (Previously completed work) created by bdezonia
Some tickets have been completed before this beta but were not classified …
13:32 Ticket #1671 (Fix build system issues) created by bdezonia
This ticket represents issues with the ImageJ2 build system and project …
13:25 Ticket #1670 (Publish ImageJ and friends to the Maven Central repository) created by curtis
ImageJ and related artifacts should be available in the Central repository …
12:12 Ticket #1669 (Break reliance on Imglib2's PlanarContainer) created by bdezonia
Internally IJ2 represents all data as an in-memory set of planes using …
11:13 Ticket #1668 (Tracking project) created by bdezonia
There is a projected related to tracking and enhancing Trackmate. This …
11:07 Ticket #1667 (Need Imglib2 compatible version of SLIM) created by bdezonia
We need a version of SLIM that utilizes Imglib2 internally. The current …
11:01 Ticket #1666 (Enhance update mechanisms) created by bdezonia
We may want to support multiple "update channels". In the process we may …
10:56 Ticket #1665 (Unify web sites) created by bdezonia
Unify wiki.imagej.net, developer.imagej.net, mirror.imagej.net
10:55 Ticket #1664 (Improve infrastructure) created by bdezonia
10:49 Ticket #1663 (Support for mixed world plugins) created by bdezonia
We should support plugins that use both ImageJ2 and IJ1 data structures …
10:43 Ticket #1662 (Fiji to include ImageJ2) created by bdezonia
We should ship all of ImageJ2 with Fiji. Users would work in IJ1 as usual …
10:37 Ticket #1661 (More seamless integration of IJ1 & IJ2 [ndim-data]) created by bdezonia

03/06/13:

16:59 Ticket #904 (Implement Threshold Plugin) closed by bdezonia
fixed
16:56 Ticket #1660 (Implement some IJ1 plugins) created by bdezonia
Some IJ1 plugins cannot be supported by the legacy translation approach. …

02/25/13:

14:09 Ticket #1659 (Remove the "Update the updater?" question from the updater) created by dscho
So far, when the updater detects an update to the updater itself, it asks …
14:07 Ticket #1658 (Teach MiniMaven to use the general Compiler API) created by dscho
Similar to ImageJ 1.x' switch (made complicated by refusing to depend on …
12:58 Ticket #1657 (Reconcile fiji-compat with ij-legacy) created by dscho
We want to ship Fiji in a version where there is a Help>Switch to ImageJ2 …
12:39 Ticket #1656 (Simplify updater tests) created by dscho
The updater unit tests are horribly complicated. Most of them, however, …

02/24/13:

13:31 Ticket #1655 (Use non-versioned filenames in the updater) created by dscho
It is quite confusing to read those long file names like …
13:07 Ticket #1654 (Fix MiniMaven when a dependency's version is specified as a non-SNAPSHOT ...) created by dscho
When building Fiji, the ImageJ version is stuck at the version MiniMaven …
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