Timeline


and

09/25/11:

22:54 Ticket #793 (Make scroll wheel behavior consistent with IJ1) created by curtis
Using the mouse scroll wheel on an open image display performs different …
22:40 Ticket #792 (Support for List as an input type) created by curtis
It would be great if an input could be a List of a supported sub-type. The …
22:37 Ticket #791 (Make input widgets discoverable) created by curtis
Right now, the input harvester has a few hardcoded widget types, roughly …
20:56 Ticket #630 (Menubar in Image Windows) closed by curtis
fixed: Fixed for a while now: 6f3d15187ee573871b15d0f23f7969808b50bc22 or …
20:31 Ticket #787 (Legacy type conversions create duplicate displays) closed by curtis
fixed: Fixed in bb5f82403503a9b93359151b3df02b9689e3a128.
20:22 Ticket #783 (Add Data hatching extra slider windows) closed by curtis
fixed: Fixed in bb5f82403503a9b93359151b3df02b9689e3a128.
20:11 Ticket #790 (Arrange Windows plugins for IJ2) created by gharris
Currently, on the Windows menu, the Show All, Put Behind, Cascade & Tile …
19:55 Ticket #789 (PixelProbe IndexOutOfBoundsException with Multi-Channel image) created by gharris
Opened multi-channel.ome.tiff sample image with IJ2 OpenFile... when …

09/23/11:

10:56 Ticket #788 (ProbeTool throws exceptions) created by bdezonia
Open Bridge. Add Axis (Z, 2). Move cursor over image. Exceptions thrown …
09:25 Ticket #776 (convert to 16-bit creates duplicate display) closed by afraser
duplicate
09:23 Ticket #784 (RGB Stack display bug) closed by afraser
duplicate
09:21 Ticket #785 (RGB Color display bug) closed by afraser
duplicate
09:21 Ticket #786 (HSB Stack display bug) closed by afraser
duplicate
09:20 Ticket #787 (Legacy type conversions create duplicate displays) created by afraser
This ticket covers the following commands Image > Type > 8-Bit Image > …
08:57 Ticket #786 (HSB Stack display bug) created by afraser
Open Clown Image > Type > HSB Stack Display window is duplicated Two …
08:51 Ticket #785 (RGB Color display bug) created by afraser
Open M51 Galaxy Image > Type > RGB Color Display window is duplicated …
06:23 Ticket #784 (RGB Stack display bug) created by afraser
Open Clown Image > Type > RGB Stack Display window is duplicated ImageJ …

09/22/11:

16:33 Ticket #783 (Add Data hatching extra slider windows) created by bdezonia
Open a 2d sample image (like Lena or Boats). Add an axis like Z or T or …
16:01 Ticket #782 (Flip horizontally [ij2] throws exception on organ of corti) closed by bdezonia
fixed
15:49 Ticket #719 (Display painting bug) closed by curtis
fixed: (In [3969]) Use Swing event service for now. This avoids a race condition …
15:43 Ticket #782 (Flip horizontally [ij2] throws exception on organ of corti) created by afraser
Open Organ of Corti run Flip Horizontally [IJ2] I get: [ERROR] Module …
14:33 Ticket #781 (Window/Level broken) created by afraser
This is filed under legacy but may be a display refresh problem. Plugin …
14:19 Ticket #780 (Color Balance broken) created by afraser
I can't seem to make this plugin do anything. Period. Tested it on …
14:02 Ticket #344 (Create OME-XML to 2D Stitcher conversion utility for Fiji) closed by curtis
fixed: I created the following plugins to address this issue: * …
13:58 Ticket #483 (File/New Action) closed by curtis
fixed: [source:trunk/core/io/src/main/java/imagej/io/plugins/NewImage.java Such a …
13:33 Ticket #779 (Brightness/Contrast [IJ2] bug) created by afraser
Open clown.jpg Image > Color >Edit Colors Color mode: Color OK (image …
12:45 Ticket #778 (Nile Bend (1.9M) doesn't display) created by afraser
Nile Bend (1.9M) sample image appears to load but never displays. I …
12:27 Ticket #777 (Some images render differently in IJ2) created by afraser
Boats.gif appears more contrasty than the IJ1 version. I've confirmed …
12:12 Ticket #776 (convert to 16-bit creates duplicate display) created by afraser
Open Clown.jpg Image > Type > 16-bit Duplicates the display and runs the …
12:06 Ticket #775 (Convert to 8-bit broken) created by afraser
Open Clown.jpg Image > Type > 8-bit Duplicates the display and runs the …
11:55 Ticket #774 (convert to 8-bit color broken) created by afraser
open clown.jpg Image > type > 8-bit Color 2 Problems: 1) The display is …
09:33 Ticket #773 (Reshaping via "Properties" sometimes crashes IJ display) created by afraser
Open the Mitosis 5D stack Image > Properties (Ctrl+Shift+P) set Channels = …

09/21/11:

18:42 Ticket #639 (ProbeTool can throw exceptions) closed by dscho
fixed: Fixed in 3d3ee0330a1a43fe2f53adb9c0da81d30d599458.
18:41 Ticket #628 (Zoom is broken) closed by dscho
fixed: Fixed in 768071be333edcd8b8b4720066ff456f9bd9fbb4.
18:31 Ticket #772 (Overlay > Add Image doesn't work) created by afraser
Overlay > Add Image doesn't appear to do anything unless the added image …
18:19 Ticket #771 (Reduce dimensionality doesn't respect selected plane) created by afraser
Try opening the mitosis 5d sample and running reduce dimensionality on it. …
17:59 Ticket #713 (Zoom to selection is broken) closed by dscho
fixed: (In [3963]) Fix ticket 713 Zoom to selection was broken because the …
12:34 Ticket #753 (Parallelize image assignment in Imglib OPS) closed by bdezonia
fixed: ComplexInageAssignment completed. Refactor done.
12:04 Ticket #770 (Image renders differently in IJ1 & IJ2) created by afraser
Attached are images that I generated by Z-Projecting the first 10 frames …
11:34 Ticket #769 (Stack to Images processes slices out of order) created by afraser
This could be a concern for people who've written macros that assume the …
11:08 Ticket #768 (Built in LUTs don't work) created by afraser
Tested on Boats sample Image > Look up tables > Fire image doesn't …

09/20/11:

22:34 Ticket #767 (tif stack loads differently in IJ1 & 2) created by afraser
I'm not sure exactly what to file this under, but basically, I used IJ1 to …
18:15 Ticket #766 (Hyperstack to Stack bug) created by afraser
Open the mitosis 5d stack sample run Image > Hyperstacks > Hyperstack to …
12:03 Ticket #765 (Import LUT does nothing) created by afraser
Tested on Bridge sample. Try the attached LUT... the image doesn't change …
10:39 Ticket #764 (New image filled with wrong value) created by afraser
File > New (legacy) type: 16 bit fill with: white Resultant image is …

09/19/11:

14:53 Ticket #626 (Newly opened images have wrong window size) closed by gharris
fixed: Turns out, we needed to add an override for Dimension getPreferredSize() …
14:32 Ticket #763 (Add Sizing Constraint of Windows on Desktop/Workspace) created by gharris
Account for the bounds of the desktop/workspace when sizing the window …

09/16/11:

14:04 Ticket #762 (IJ1 Cut/Copy/Paste gets tangled with IJ2 functions on Overlays) created by afraser
This is a tough one to describe since I've seen just about every …
13:29 Ticket #761 (Selection > Make Inverse throws exception) created by afraser
Create a new image and draw an overlay in it, then choose Edit > Selection …
13:13 Ticket #760 (IJ1 Plugins that hatch threads are problematic) created by bdezonia
Currently LegacyPlugin relies on the assumption that the plugin that gets …
13:05 Ticket #759 (IJ1/IJ2 Options synchronization bugs) created by bdezonia
The options synchronization code that shipped with alpha 5 is not correct. …
12:24 Ticket #758 (Analyze Particles reports different values than in IJ1) created by afraser
To reproduce: open Bat Cochlea Volume and scrub to Z=28 Run Analyze …
11:13 Ticket #757 (Discrepancies in "Measure" values) created by afraser
Mean, Min and Max don't compute the same as they did before in some cases. …
11:03 Ticket #756 (Threshold broken) created by afraser
To replicate: Open Samples > Cell Colony Image > Color > Split Channels …

09/15/11:

10:19 Ticket #755 (Enhance Imglib OPS' image assignment classes) created by bdezonia
In the original implementation of OPS (rev2) you could update listeners …
10:02 Ticket #754 (Enhance Imglib OPS to support out of bounds access to Img data) created by bdezonia
Enhance RealImageFunction and ComplexImageFunction to have alternate …
09:59 Ticket #753 (Parallelize image assignment in Imglib OPS) created by bdezonia
Make RealImageAssignment and ComplexImageAssignment do their work in a …

09/14/11:

13:15 Ticket #752 (IJ2 options values do not reflect changes from IJ1 plugins/macros) closed by bdezonia
fixed: Found the issue after alpha 5 released. Fixed in …
13:14 Ticket #752 (IJ2 options values do not reflect changes from IJ1 plugins/macros) created by bdezonia
If IJ1 changes a global value that is used in an IJ2 options dialog it is …
11:20 Ticket #751 (Legacy translation test cases) created by bdezonia
Here are a couple use cases to support: User opens bridge, adds a channel …

09/13/11:

16:35 Milestone imagej-2.0-alpha5 completed
An alpha release demonstrating the new class hierarchy, plugin …
13:53 Ticket #750 (Anonymous usage statistics service) created by curtis
We should create a service for monitoring anonymous usage statistics and …
10:24 Ticket #749 (Window menu bug) created by bdezonia
Open three sample images. Select the first image. No windows are displayed …
09:42 Ticket #748 (Keep IJ2 options in sync with IJ1 globals) closed by bdezonia
fixed: Fixed in a4dadc2c70dcf64253eb1c64d7dedc1c4dbf9d1d

09/12/11:

15:06 Ticket #372 (Change location of preference keys) closed by bdezonia
fixed: Removed SettingsKeys completely in …
15:03 Ticket #748 (Keep IJ2 options in sync with IJ1 globals) created by bdezonia
IJ1 has a few public variables (such as FloatBlitter.dbzValue or lineWidth …
15:01 Ticket #365 (Interoperability with legacy IJ_Prefs.txt) closed by bdezonia
fixed: Much code changed by Curtis and Barry. Major commit in …
14:58 Ticket #373 (Setup preferences correctly at program startup) closed by bdezonia
fixed: Fixes by Curtis and Barry. Final commit in …
13:48 Ticket #747 (Allow a plugin parameter to be both an input & an output) created by curtis
Sometimes it may make sense for a plugin parameter to be both an input and …
10:40 Ticket #733 (Exception in Split Channels) closed by afraser
fixed: looks like Lee fixed this.
10:35 Ticket #704 (Bug in AbstractRegionOfInterest) closed by leek
fixed: I've fixed this and reported to Christian, just didn't see that it was …

09/09/11:

13:10 Ticket #734 (Close Window throws exception) closed by gharris
worksforme: Works for me.

09/07/11:

14:16 Ticket #692 (Exception thrown for BigInteger parameters) closed by curtis
fixed: Fixed in 76e206b51e4ae451eef74dd1ca44fb33ddd9d55c. The problem was that …

09/06/11:

16:23 Ticket #746 (Delete Axis can fail) created by bdezonia
Sometimes Delete Axis fails to remove an axis (or the right one). You can …
14:40 Ticket #672 (Delete Axis can throw a concurrent modification exception) closed by bdezonia
fixed: refixed with cec28bc4630ec860ca5923887f975a5ccc0ce53d
13:02 Ticket #745 (Display issues with rotate and crop) created by bdezonia
If you rotate an image there is extra whitespace in the display. If you …
12:50 Ticket #744 (Verify Imglib OPS function definitions & inputs) created by bdezonia
A goodly number of operations were added to OPS recently - both in the …
12:44 Ticket #743 (Add Axis plugin doesn't always work) created by bdezonia
Open Organ of Corti and run Add Axis. Sometimes it doesn't add the new …
12:16 Ticket #742 (The App might need to do event dispatching) created by bdezonia
Before Grant's refactor of the Display hierarchy (and also Curtis' later …
12:13 Ticket #741 (Update the website re: IJ1 compatibility) created by bdezonia
Update the imagejdev.org website to explain how we are hadnling …
12:11 Ticket #740 (Stack to Images slow) created by bdezonia
The stack to images IJ1 command can run slowly. Determine if its too slow …
12:09 Ticket #739 (ShowInfo plugin needs an IJ2 version) created by bdezonia
The Show Info plugin reports things like pixel type. This cannot work …
12:02 Ticket #672 (Delete Axis can throw a concurrent modification exception) reopened by bdezonia
As a result of the recent display refactoring this bug has been …
11:28 Ticket #738 (Make example work that showcases IJ2) created by bdezonia
We have an image (Day 1 Naked NB positive 1-2007-0055.zvi) which has 12 …
11:22 Ticket #737 (Add out of bounds capability to Imglib OPS) created by bdezonia
In OPS image data support exists in RealImageFunction and …
11:20 Ticket #736 (Update dynamic plugins that deal with axis ranges) created by bdezonia
Some of the DynamicPlugins are interested in the min and max values of the …

09/02/11:

13:40 Ticket #515 (Performance improve OPS) closed by bdezonia
fixed: Some time ago a whole new implementation of OPS was committed. This ticket …
10:03 Ticket #619 (Displays should listen to DataObject deletion events) closed by gharris
invalid
09:59 Ticket #730 (Display Hierarchy Refactoring) closed by gharris
fixed: Essentially complete.
09:57 Ticket #567 (Validate Contrast/Brightness values) closed by gharris
duplicate: Merged with #585
09:56 Ticket #441 (Window menu commands do not work) closed by gharris
fixed
09:55 Ticket #584 (Get Open Recent menu working) closed by gharris
fixed: See follow-on issues in #735
09:54 Ticket #735 (Add Persistence to RecentFile Menu) created by gharris
Does not persist between sessions - add persistence mechanism Only …
09:49 Ticket #663 (Refactor some display hierarchy code) closed by gharris
fixed: Closed, See #730

09/01/11:

12:40 Ticket #726 (Ensure Physical Pixel Sizes are preserved) closed by hinerm
fixed: Pixel Spacing was revealed to be improperly preserved when writing with …
12:30 Ticket #724 (Preserve Original Metadata) closed by hinerm
fixed: The only metadata found as not being preserved was Pixel Type and Number …
10:09 Ticket #732 (Some KeyEvents are getting lost) closed by gharris
fixed: I created AWTKeyEventDispatcherGlobal which intercepts all keystrokes in …

08/31/11:

14:23 Ticket #734 (Close Window throws exception) created by afraser
File > Close (Cmd+W) doesn't completely close the display window and …
13:35 Ticket #733 (Exception in Split Channels) created by afraser
Splits clown.jpg OK, but fails to close the original display. and throws: …
12:28 Ticket #421 (Animations of stacks do not display anything) closed by bdezonia
fixed: In 97076296e03e6340dc93997e2871120e092e0b4f made a couple methods …
10:38 Ticket #670 (Improve stack animation code) closed by bdezonia
fixed: Fixed in c40fe1ddc3eecaa74ab4e9c551ee489950d0d461, …
10:34 Ticket #732 (Some KeyEvents are getting lost) created by bdezonia
When you run animations (from the NEW Image :: Stacks :: Tools :: Start …

08/29/11:

10:56 Ticket #594 (Output Window) closed by curtis
fixed: Creation issue addressed in 2ab230a321e941824fecc87a1540b8dfa495462f and …
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