Timeline


and

04/25/11:

15:22 Ticket #458 (Relax type constraints on imlib-ops AssignOperation) created by bdezonia
An AssignOperation takes a type as a parameter that it holds all input and …
15:01 Ticket #457 (Make sure existing plugins can handle N-dim data) closed by bdezonia
fixed
15:01 Ticket #457 (Make sure existing plugins can handle N-dim data) created by bdezonia
Some plugins only work with 2d data. These include Salt And Pepper, Flip …
13:00 Ticket #454 (Migrate core plugins to Imglib2) closed by bdezonia
fixed: tested and working with minor changes
11:32 Ticket #21 (Support for data source abstraction) closed by curtis
fixed: At this point we are confident in ImgLib2's container mechanism.
11:29 Ticket #353 (IJ Commands List - update) closed by curtis
wontfix
11:29 Ticket #368 (Tool / Display Cursor Interaction) closed by curtis
fixed: This works!
11:24 Ticket #440 (Merge and reorganize imglib2's ROI and labeling code) closed by curtis
fixed: The ROI code has been merged into imglib2 core. It doesn't have any extra …
11:23 Ticket #442 (Add JHotDraw to Nexus) closed by curtis
fixed
11:22 Ticket #162 (Maven: research use of Maven with native libraries) closed by curtis
fixed: At this point Aivar has done a lot more research into this issue, and …

04/22/11:

23:00 Milestone biweekly-2011: Apr-11 to Apr-22 completed
Tasks from 2011-Apr-11 through 2011-Apr-22.
15:16 Ticket #456 (Implement checkmark cpability in the Swing UI menus) created by bdezonia
There is no code in place for setting check mark in menu showing the type …
15:15 Ticket #455 (Replace the color oriented Image Type submenu plugins with something ...) created by bdezonia
The ImageJ2 Image Type submenu still loads the ImageJ1 color translation …
15:11 Ticket #425 (Implement the Image > Type submenu functionality) closed by bdezonia
fixed: opening new tickets delineating remaining todos on this ticket and …
15:08 Ticket #454 (Migrate core plugins to Imglib2) created by bdezonia
Make imagej's core plugins compatible with imglib2
15:07 Ticket #453 (Migrate imglib-ops to Imglib2) closed by bdezonia
fixed
15:07 Ticket #453 (Migrate imglib-ops to Imglib2) created by bdezonia
Make imglib ops compatible with imglib2
14:08 Ticket #169 (Update bf-itk to work under the new project structure) closed by hinerm
fixed: Two of the bf-itk implementations (jni and pipes) are now entirely …
13:43 Ticket #452 (Color Composite Display components) created by gharris
Color Composite Display components Changes to Composite display …

04/20/11:

17:44 Ticket #451 (Zoom bug: zoom user defined) created by bdezonia
Choosing user defined zoom and choosing 400% you can see that the image, …
17:38 Ticket #450 (Zoom bug: zoom in) created by bdezonia
Zoom out via mouse wheel as far as is feasible. Now zoom in over center. …
17:13 Ticket #449 (Zoom bug: Pan now broken) created by bdezonia
The pan code in SwingNavigableImageCanvas was modified to work in Image …
17:09 Ticket #448 (Zoom bug: zoom to rect) created by bdezonia
Zooming to a selected rectangle is not accurate. This functionality can be …
17:05 Ticket #447 (Zoom bug: zoom out) created by bdezonia
Zooming out via the scroll wheel can cause the image display to drift. The …
16:59 Ticket #446 (Support an active display concept) closed by bdezonia
fixed: implemented as part of the support for the zoom plugins. each UI is …
16:57 Ticket #446 (Support an active display concept) created by bdezonia
Have IJ2 always track which display is active. This could be used by …
16:39 Ticket #401 (Port the Image Zoom submenu plugins to IJ2) closed by bdezonia
fixed: will open separate tickets for zoom plugin bugs.
16:38 Ticket #340 (Migrate IJ2 Dataset to use Imglib's Img interface) closed by bdezonia
fixed: I believe Curtis has done this work.
16:37 Ticket #445 (Add unit support to IJ2 as needed) created by bdezonia
Add the capability to tag axes with units. Curtis had planned to use an …
16:36 Ticket #341 (Fix/enhance Imglib 2.0 for use by ImageJ 2) closed by bdezonia
fixed: I think all that is left with this is to add units to ImageJ (or Imglib). …

04/14/11:

16:43 Ticket #444 (Improve how the Display framework handles large images) created by bdezonia
Currently AWTDisplayController is responsible for creating BufferedImages …

04/12/11:

16:00 Ticket #443 (Zoom plugin hotkeys are not working) created by bdezonia
The Image > Zoom submenu command plugins are in place. The keyboard …

04/11/11:

17:45 Ticket #442 (Add JHotDraw to Nexus) created by curtis
Deploy the compiled JHotDraw7 JAR to the ImageJDev Nexus.
17:04 Ticket #441 (Window menu commands do not work) created by bdezonia
IJ1's Window menu is not updated as images are opened. None of the Window …
16:14 Ticket #370 (Probe Tool) reopened by bdezonia
15:01 Ticket #400 (Fix dev backup scripts) closed by curtis
fixed: Fixed on March 30.
14:51 Ticket #440 (Merge and reorganize imglib2's ROI and labeling code) created by curtis
Merge imglib2-roi into imglib2 branch, moving the ROI and labeling code …
11:40 Ticket #370 (Probe Tool) closed by bdezonia
fixed
10:15 Ticket #439 (Support Image File Drag & Drop like IJ1) created by bdezonia
In IJ1 you can drag an image from Finder and drop it on the application …
10:10 Ticket #438 (Problems with loading big images) created by bdezonia
I have a 12756 × 3487 RGB JPEG file on my system (mars_landscape) that I …

04/08/11:

23:00 Milestone biweekly-2011: Mar-28 to Apr-08 completed
Tasks from 2011-Mar-28 through 2011-Apr-08.
11:13 Ticket #437 (Zoom hotkeys should match IJ1) created by bdezonia
In IJ1 there is some flexibility with zoom in/out hotkeys - zoom in : …
10:28 Ticket #436 (Closing IJ2 can be annoying) created by bdezonia
Start IJ2. Start another app. Now close IJ2 by selecting its red close …
10:23 Ticket #435 (Mouse click events counted twice) created by bdezonia
Clicking on a window generates two mouse clicked events for a single …

04/06/11:

13:03 Ticket #434 (Make IJ2 probe more like IJ1) created by bdezonia
In IJ1 the probe sends status updates whenever the cursor is over an image …
12:18 Ticket #433 (IJ1 loses track of current window) created by bdezonia
We need to make sure IJ1 and IJ2 both know what the currently active …
11:26 Ticket #426 (Check how Prefs are being persisted) closed by bdezonia
invalid: pretty sure this is a nonissue. looking at my pref files I see its size is …
10:39 Ticket #432 (Remove requirement that Axes[0] == X && Axes[1] == Y) created by bdezonia
There are a number of places in IJ2 where an algorithm assumes the x …
10:28 Ticket #429 (Fix probe tool to support all pixel types) closed by bdezonia
fixed: implemented a fix for issue #1 that does much less cursor and position …

04/05/11:

16:49 Ticket #431 (Make smooth, sharpen, and find edges work on N dim datasets) closed by bdezonia
fixed: fixed also applies to the Shadows menu
16:27 Ticket #431 (Make smooth, sharpen, and find edges work on N dim datasets) created by bdezonia
Ij1 allows smooth, sharpen, and find edges to be applied to Datasets of …
16:25 Ticket #430 (Cleanup plugins) closed by bdezonia
fixed
16:25 Ticket #430 (Cleanup plugins) created by bdezonia
Now that in place Dataset changes work remove the output Dataset …
12:27 Ticket #429 (Fix probe tool to support all pixel types) created by bdezonia
Now that the Image > Type submenu commands are in place it is apparent …
12:24 Ticket #428 (Fix display of nonprimitive pixel type images) closed by bdezonia
fixed
12:24 Ticket #428 (Fix display of nonprimitive pixel type images) created by bdezonia
Now that the Image > Type submenu commands are in place it is apparent …

04/04/11:

14:27 Ticket #385 (Plugin code tasks) closed by bdezonia
fixed: clsing this and opening spearate ticket for Preview support in plugins
14:26 Ticket #427 (Make some Process > Math plugins have preview ability) created by bdezonia
In IJ1 some of the Process > Math plugins allowed one to preview the …
14:18 Ticket #426 (Check how Prefs are being persisted) created by bdezonia
It is likely that our use of Prefs is resulting in the persistance of bad …
14:10 Ticket #415 (Implement the Image > Zoom menu commands) closed by bdezonia
duplicate
13:56 Ticket #414 (Zoom acting quirky) closed by bdezonia
worksforme: can no longer duplicate
12:25 Ticket #425 (Implement the Image > Type submenu functionality) created by bdezonia
Write plugins to support the Image > Type submenu commands

04/01/11:

17:45 Milestone imagej-2.0-alpha1 completed
An alpha release demonstrating the new class hierarchy, plugin …
17:37 Ticket #363 (Create ImageJDev hackathon results page and email ImageJ list) closed by curtis
fixed: Release …
16:31 Ticket #424 (T1 Head slider confusingly named) created by bdezonia
We are treating all IJ1 image stacks as labeled XYCZT. For the T1 Head …
15:48 Ticket #423 (Z Project can fail with an exception) created by bdezonia
Using the Image > Stacks > Z Project command with T1 Head can fail. If you …
15:31 Ticket #420 (Remove hacks for displaying README.txt) closed by curtis
fixed: Fixed in 95f667bf74067cdaafd61735b9514c8b6e7577df.
15:13 Ticket #422 (Stack To Images command throws exception) created by bdezonia
If you load T1 Head sample image and then try to run Image > Stacks > …
14:55 Ticket #421 (Animations of stacks do not display anything) created by bdezonia
Load T1 Head sample image. Then use Image > Stacks > Tools > Start …
13:06 Ticket #418 (The Process > Binary > Close command is broken) closed by bdezonia
invalid: apparently this command is working also command name in menu is the same …
02:00 Ticket #408 (Hook up Mac specific events in the UI) closed by curtis
fixed: First implementation in b8b65a4e2dc32814604210eaf75c9b5dbf00b5c9.
00:27 Ticket #407 (Mirror IJ1's behavior when clicking on application status area) closed by curtis
fixed: Fixed in 843531787d810ffd32fc66c9d3dc94b32b6bafa9.

03/31/11:

17:19 Ticket #420 (Remove hacks for displaying README.txt) created by bdezonia
The code in SwingUI.java that is used to display the README.txt file is …
17:12 Ticket #419 (The XY flipping plugins do not seem to work) created by bdezonia
The XY manipulating plugins (crop, duplicate, flip horz, flip vert, rot 90 …
16:58 Ticket #418 (The Process > Binary > Close command is broken) created by bdezonia
The Close command in the Binary submenu does not display correctly. There …
16:56 Ticket #417 (The Process > Shadows > Shadows Demo menu command is broken) created by bdezonia
If you run the Shadows Demo menu command nothing appears to happen. …
16:52 Ticket #416 (Make existing Zoom Tool react to mouse wheel and keyboard shortcuts) created by bdezonia
16:51 Ticket #415 (Implement the Image > Zoom menu commands) created by bdezonia
The IJ1 Image Zoom menu commands do not work in IJ2. Write pure IJ2 …
16:49 Ticket #414 (Zoom acting quirky) created by bdezonia
Zoom can get in a funky state where the zooming center cannot be changed. …
16:46 Ticket #413 (Delete Datasets when appropriate) created by bdezonia
Currently when a loaded image's window is closed the Dataset is not …
16:42 Ticket #405 (Make available a list of known issues) closed by bdezonia
fixed: Put code in place to read the README.txt file that lives in the …
16:40 Ticket #398 (fix NavigableImageFrame issue with initial display of image data) closed by bdezonia
fixed: yes. fixed.
15:57 Ticket #404 (Improve IJ2 Tool framework) closed by curtis
fixed: Fixed in 0898a2d728a74ce28b1dd2d5ffd070c332b99d64.
14:51 Ticket #386 (Polish UI : Tools) closed by curtis
fixed: Fixed in 0898a2d728a74ce28b1dd2d5ffd070c332b99d64.
13:14 Ticket #409 (Make the menubar more friendly) closed by curtis
fixed: Fixed in c02b11f42cc6d6da455e5756868185e1af04e63f.

03/30/11:

14:45 Ticket #412 (Implement ZoomTool) closed by bdezonia
fixed
14:45 Ticket #412 (Implement ZoomTool) created by bdezonia
Using the code in NavigableImagePanel implement the core of the ZoomTool.
14:43 Ticket #387 (Polish UI : improve the initial display of image data) closed by bdezonia
fixed: fixed an issue where 2d images would allocate space for nonexistent …
14:41 Ticket #387 (Polish UI : improve the initial display of image data) reopened by bdezonia
14:37 Ticket #393 (Make core plugins work on actual data) closed by bdezonia
fixed
14:35 Ticket #390 (Make legacy layer reuse existing displays when possible) closed by bdezonia
fixed
14:34 Ticket #410 (Debug why changing a Dataset in place hatches a new window) closed by bdezonia
fixed
14:30 Ticket #411 (Make plugins allow in place editing of images) closed by bdezonia
fixed: Fixed all existing core plugins. Modified Dataset to allow it's internal …
14:24 Ticket #411 (Make plugins allow in place editing of images) created by bdezonia
Now that the display code allows one to update an existing display rather …

03/29/11:

17:25 Ticket #410 (Debug why changing a Dataset in place hatches a new window) created by bdezonia
Curtis put the code in place to update a display if a Dataset is changed …
17:24 Ticket #409 (Make the menubar more friendly) created by bdezonia
In IJ2 when you open an image in a window the menu bar disappears until …
16:00 Ticket #408 (Hook up Mac specific events in the UI) created by bdezonia
PlatformMacOSX is fully written and publishes platform events. Make our …
15:47 Ticket #407 (Mirror IJ1's behavior when clicking on application status area) created by bdezonia
IJ1 shows a textual summary of items normally displayed in the about box …
15:43 Ticket #406 (Make a new About dialog) created by bdezonia
Create an IJ2 specific about dialog. Display some image (from LOCI's …
15:39 Ticket #405 (Make available a list of known issues) created by bdezonia
Create a text file that can contain a list of known issues. When IJ2 …
15:36 Ticket #404 (Improve IJ2 Tool framework) created by bdezonia
We need to be able to order the toolbar entries to be more like IJ1. To go …
15:31 Ticket #403 (Utilize the active Dataset in plugins) created by bdezonia
To avoid popping up a dialog everytime a plugin wants some kind of input …
11:59 Ticket #402 (Report zoom level for each open image) closed by bdezonia
fixed: Done

03/28/11:

15:04 Ticket #402 (Report zoom level for each open image) created by bdezonia
IJ1 reports the current zoom level of an image in the image window's title …
14:48 Ticket #401 (Port the Image Zoom submenu plugins to IJ2) created by bdezonia
With the new zoom tool in the NavigleableImagePanel it is fairly easy to …
11:00 Ticket #400 (Fix dev backup scripts) created by curtis
The dev cron scripts are not properly backing up the development tool …
10:54 Ticket #360 (File tickets for ImageJ priorities) reopened by curtis
10:54 Ticket #360 (File tickets for ImageJ priorities) closed by curtis
fixed
10:53 Ticket #343 (Create graphical WiscScan OME-XML repair tool) closed by curtis
wontfix: Due to time constraints, the current plan is to implement the OME-XML …
10:34 Ticket #382 (Set up Dropbox on LOCI OMERO server) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
10:34 Ticket #383 (Create SMB+OMERO accounts) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
10:34 Ticket #381 (Configure SMB for LOCI OMERO server) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
09:21 Ticket #397 (Cannot open Nile Bend sample image (memory issue)) closed by bdezonia
invalid: using the jvm argument -m to the imagej run configuration in eclipse I can …
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