Timeline


and

03/30/11:

14:45 Ticket #412 (Implement ZoomTool) closed by bdezonia
fixed
14:45 Ticket #412 (Implement ZoomTool) created by bdezonia
Using the code in NavigableImagePanel implement the core of the ZoomTool.
14:43 Ticket #387 (Polish UI : improve the initial display of image data) closed by bdezonia
fixed: fixed an issue where 2d images would allocate space for nonexistent …
14:41 Ticket #387 (Polish UI : improve the initial display of image data) reopened by bdezonia
14:37 Ticket #393 (Make core plugins work on actual data) closed by bdezonia
fixed
14:35 Ticket #390 (Make legacy layer reuse existing displays when possible) closed by bdezonia
fixed
14:34 Ticket #410 (Debug why changing a Dataset in place hatches a new window) closed by bdezonia
fixed
14:30 Ticket #411 (Make plugins allow in place editing of images) closed by bdezonia
fixed: Fixed all existing core plugins. Modified Dataset to allow it's internal …
14:24 Ticket #411 (Make plugins allow in place editing of images) created by bdezonia
Now that the display code allows one to update an existing display rather …

03/29/11:

17:25 Ticket #410 (Debug why changing a Dataset in place hatches a new window) created by bdezonia
Curtis put the code in place to update a display if a Dataset is changed …
17:24 Ticket #409 (Make the menubar more friendly) created by bdezonia
In IJ2 when you open an image in a window the menu bar disappears until …
16:00 Ticket #408 (Hook up Mac specific events in the UI) created by bdezonia
PlatformMacOSX is fully written and publishes platform events. Make our …
15:47 Ticket #407 (Mirror IJ1's behavior when clicking on application status area) created by bdezonia
IJ1 shows a textual summary of items normally displayed in the about box …
15:43 Ticket #406 (Make a new About dialog) created by bdezonia
Create an IJ2 specific about dialog. Display some image (from LOCI's …
15:39 Ticket #405 (Make available a list of known issues) created by bdezonia
Create a text file that can contain a list of known issues. When IJ2 …
15:36 Ticket #404 (Improve IJ2 Tool framework) created by bdezonia
We need to be able to order the toolbar entries to be more like IJ1. To go …
15:31 Ticket #403 (Utilize the active Dataset in plugins) created by bdezonia
To avoid popping up a dialog everytime a plugin wants some kind of input …
11:59 Ticket #402 (Report zoom level for each open image) closed by bdezonia
fixed: Done

03/28/11:

15:04 Ticket #402 (Report zoom level for each open image) created by bdezonia
IJ1 reports the current zoom level of an image in the image window's title …
14:48 Ticket #401 (Port the Image Zoom submenu plugins to IJ2) created by bdezonia
With the new zoom tool in the NavigleableImagePanel it is fairly easy to …
11:00 Ticket #400 (Fix dev backup scripts) created by curtis
The dev cron scripts are not properly backing up the development tool …
10:54 Ticket #360 (File tickets for ImageJ priorities) reopened by curtis
10:54 Ticket #360 (File tickets for ImageJ priorities) closed by curtis
fixed
10:53 Ticket #343 (Create graphical WiscScan OME-XML repair tool) closed by curtis
wontfix: Due to time constraints, the current plan is to implement the OME-XML …
10:34 Ticket #382 (Set up Dropbox on LOCI OMERO server) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
10:34 Ticket #383 (Create SMB+OMERO accounts) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
10:34 Ticket #381 (Configure SMB for LOCI OMERO server) closed by curtis
invalid: Tickets #381, #382 and #383 have been handed off to Hanly. I will assist …
09:21 Ticket #397 (Cannot open Nile Bend sample image (memory issue)) closed by bdezonia
invalid: using the jvm argument -m to the imagej run configuration in eclipse I can …

03/25/11:

23:00 Milestone biweekly-2011: Mar-14 to Mar-25 completed
Tasks from 2011-Mar-14 through 2011-Mar-25.
11:55 Ticket #396 (Cannot open FlyBrain sample image (display issue)) closed by bdezonia
fixed: plane index calculation was incorrect. fixed.
11:29 Ticket #395 (Sometimes sliders throw exceptions) closed by bdezonia
fixed: fix applied. plane numbers were getting calculated relative to all …

03/24/11:

16:09 Ticket #361 (Create web page for Imagej release schedule) closed by curtis
fixed: Release schedule posted on the [ http://imagejdev.org/downloads Downloads …
16:02 Ticket #362 (Reply to critical emails) closed by curtis
fixed: The most urgent ones are done.
15:26 Ticket #399 (Reenable navigation preview image functionality) created by bdezonia
The navigation preview feature of NavigableImagePanel was removed from …
15:20 Ticket #398 (fix NavigableImageFrame issue with initial display of image data) created by bdezonia
The code for initializing sliders in NavigableImageFrame can impact the …
15:16 Ticket #387 (Polish UI : improve the initial display of image data) closed by bdezonia
fixed: finished fixing initial display of image at 1:1 scale. there is an …
11:10 Ticket #397 (Cannot open Nile Bend sample image (memory issue)) created by bdezonia
Opening the Nile Bend sample image results in an OutOfMemoryException …
11:06 Ticket #396 (Cannot open FlyBrain sample image (display issue)) created by bdezonia
Opening the FlyBrain sample image results in an IllegalArgumentException …
10:59 Ticket #395 (Sometimes sliders throw exceptions) created by bdezonia
Moving sliders of images can result in out of bounds exceptions. Open any …
10:50 Ticket #394 (Unsigned 16 bit images display as all black) created by bdezonia
Opening the following samples (all of them 16-bit) displays images that …

03/23/11:

17:55 Ticket #380 (Add support for interdependent parameters) closed by curtis
fixed: Initial implementation of callback methods in …
13:40 Ticket #393 (Make core plugins work on actual data) created by bdezonia
Most of the core plugins deal with transforming Image data. They take …
13:20 Ticket #392 (Handle IJ1's in place manipulations of ImagePluses) created by bdezonia
Our code to display Datasets will need to be smart about some of the …
13:10 Ticket #391 (Handle case of choosing among multiple display plugins for a single ...) created by bdezonia
When a Dataset can be displayed in multiple ways must be able to handle …
12:57 Ticket #390 (Make legacy layer reuse existing displays when possible) created by bdezonia
When running plugins IJ2 hatches new image Windows where IJ1 may not. …
12:11 Ticket #388 (Make color images display in Ij2) closed by bdezonia
fixed: Rewrote/refactored ImageTranslator in the legacy layer to support …

03/22/11:

15:59 Ticket #389 (Be able to pull data out of a Dataset without precision loss) created by bdezonia
In the long run it would be nice to pull numbers out of a Dataset at a …
15:34 Ticket #388 (Make color images display in Ij2) created by bdezonia
Right now if you load clown in IJ2 a black image is displayed. For now we …
15:31 Ticket #387 (Polish UI : improve the initial display of image data) created by bdezonia
When opening an image have it come up in the display at 100% with window …
15:29 Ticket #386 (Polish UI : Tools) created by bdezonia
1) Remove tools that don't currently work from the application 2) Sort …
15:24 Ticket #385 (Plugin code tasks) created by bdezonia
The various plugins have scaffolding code that needs to be removed when …
13:30 Ticket #371 (Make pure IJ2 plugins aware of selection region) closed by bdezonia
fixed: Made all existing plugins work with a selected region if that is the …
09:58 Ticket #384 (Display autoscaling) created by gharris
The display should support autoscaling according to the actual minimum and …

03/17/11:

16:46 Ticket #383 (Create SMB+OMERO accounts) created by curtis
I need to set up matching SMB and OMERO accounts on the …
16:45 Ticket #382 (Set up Dropbox on LOCI OMERO server) created by curtis
I need to set up Dropbox on the open.microscopy.wisc.edu machine. See also …
16:44 Ticket #381 (Configure SMB for LOCI OMERO server) created by curtis
I need to set up Samba with user-level authentication (separate folder per …
12:47 Ticket #380 (Add support for interdependent parameters) created by curtis
The plugin framework needs a way for changes to one parameter value to …
12:42 Ticket #379 (Add support for plugin previews) created by curtis
The plugin framework needs a way to provide a preview in response to input …
12:40 Ticket #378 (Fix buggy Number parameter widgets) created by curtis
The plugin framework currently supports multiple "widget styles" which are …
12:38 Ticket #377 (Support for color parameters) created by curtis
The plugin framework needs to support @Parameters of type java.awt.Color …
12:36 Ticket #376 (Support for checkbox menu items) created by curtis
The plugin framework needs a "boolean checkbox" field in @Parameter that …

03/15/11:

11:11 Ticket #375 (Make CP write tags to OMERO) created by afraser
first pass. write a basic module that will set a tag on a particular image …
07:18 Ticket #374 (Multi-channel .tif files in CellProfiler) created by leek
CellProfiler needs to be able to write .tif files with an arbitrary number …

03/14/11:

14:39 Ticket #373 (Setup preferences correctly at program startup) created by bdezonia
IJ1 & IJ2 maintain similar settings. We will have code for keeping them in …
13:31 Ticket #372 (Change location of preference keys) created by bdezonia
In order to get the Preference code working a class called SettingsKeys …
11:16 Ticket #371 (Make pure IJ2 plugins aware of selection region) created by bdezonia
Currently the existing pure IJ2 plugins work on the whole image. Change …
11:15 Ticket #370 (Probe Tool) created by gharris
Show x,y, pixel value in StatusBar
10:58 Ticket #369 (Polish up SLIM Curve for TRI2) created by aivar
FIx issues that prevent TRI2 from using SLIM Curve. See LOCI Trac for …
10:04 Ticket #368 (Tool / Display Cursor Interaction) created by gharris
Implement interaction between ToolManager and display, e.g for setting …

03/13/11:

22:33 Ticket #367 (Update LOCI repositories and Tracs) created by curtis
The misc repository should be migrated into internal, with public-facing …
22:30 Ticket #366 (Combine Options into a single tabbed dialog) created by curtis
Currently there are many Edit > Options plugin dialogs, corresponding to …
22:27 Ticket #365 (Interoperability with legacy IJ_Prefs.txt) created by curtis
ImageJ 1.x uses a file called IJ_Prefs.txt to record preferences and …
22:24 Ticket #364 (Support for composite displays) created by curtis
The display architecture needs to support "composite image" displays like …
22:06 Ticket #363 (Create ImageJDev hackathon results page and email ImageJ list) created by curtis
We need to update the ImageJDev web site with a summary of the hackathon …
21:49 Ticket #362 (Reply to critical emails) created by curtis
A few outstanding emails need a reply ASAP, before I can return to other …
21:46 Ticket #361 (Create web page for Imagej release schedule) created by curtis
The ImageJ release schedule should be posted online at ImageJDev.org, with …
21:44 Ticket #360 (File tickets for ImageJ priorities) created by curtis
The ImageJDev team made a list of priorities for each alpha and beta …
21:34 Ticket #359 (Update "current status" page on ImageJDev.org) created by curtis
The "current status" page is now over two months out of date, and needs to …

03/11/11:

23:00 Milestone biweekly-2011: Feb-28 to Mar-11 completed
Tasks from 2011-Feb-28 through 2011-Mar-11.
11:17 Ticket #358 (Work on keystroke acceleration for IJ2) created by bdezonia
Figure out how to get keyboard accelerators to work in IJ2. Implement in …
11:09 Ticket #357 (Create SettingsKeys and utilize in plugins) closed by bdezonia
fixed
11:09 Ticket #357 (Create SettingsKeys and utilize in plugins) created by bdezonia
Create some global keys for use with persistent Prefs. Incorporate in the …
11:06 Ticket #356 (Implement the various Edit Options dialogs) closed by bdezonia
fixed
11:06 Ticket #356 (Implement the various Edit Options dialogs) created by bdezonia
Replace the edit options dialogs to be pure IJ2 plugins. The run() method …
11:04 Ticket #355 (AbstractInputHarvester throws exception for ranged fields) closed by bdezonia
fixed
11:03 Ticket #355 (AbstractInputHarvester throws exception for ranged fields) created by bdezonia
If a parameter in a plugin has a valid range that does not include zero …
11:00 Ticket #347 (Port IJ1 plugins to IJ2) closed by bdezonia
fixed: Process>Math plugins refactored to use UnaryTransformation. All plugins …

03/10/11:

15:37 Ticket #354 (Set up Fiji update site for LOCI plugins) created by curtis
The Fiji multi-site updater is now functional, so we should start …
13:19 Ticket #353 (IJ Commands List - update) created by gharris
Update the list of ImageJ Commands (core plugins) to reflect the current …
13:16 Ticket #352 (Define ROIs & Selections in relation to Img's) created by gharris
Define functionality ROIs and Selections on Img<T>'s in the context of …
13:12 Ticket #351 (Copy/Paste functionality) created by gharris
Define functionality of copy and paste operations on Img<T>'s in the …
13:09 Ticket #350 (NavigationImage) created by gharris
Separate NavigationImage from NavigableImagePanel
13:07 Ticket #349 (Zoom Tool) created by gharris
Zoom Tool - Implement using new tool infrastructure

03/08/11:

11:20 Ticket #346 (ITool) closed by curtis
fixed: The ij-tool and ij-core-tools projects exist, and PanTool is ostensibly …
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