16:21 Ticket #344 (Create OME-XML to 2D Stitcher conversion utility for Fiji) created by curtis
Johannes Schindelin and I discussed a conversion tool for reading OME-XML …
16:19 Ticket #343 (Create graphical WiscScan OME-XML repair tool) created by curtis
Eric Alexander adapted CommentSurgery to fix malformed OME-TIFF files from …
12:58 Ticket #342 (Catch up on email) created by curtis
The hackathon left me woefully behind on email.
11:21 Ticket #341 (Fix/enhance Imglib 2.0 for use by ImageJ 2) created by bdezonia
Imglib2 will be pulled into the core of IJ2. It needs some work for that …
10:57 Ticket #121 (CellProfiler 2.0 paper highlighting ImageJ interoperability) closed by leek
10:55 Ticket #340 (Migrate IJ2 Dataset to use Imglib's Img interface) created by bdezonia
The Dataset code currently in IJ2 needs to be retired. Move code toward …
10:47 Ticket #322 (Improve mutability of Datasets) closed by bdezonia
10:46 Ticket #339 (Reconcile ImageJ plugin framework and workflow engine) created by curtis
Aivar wrote a nice workflow engine with some general module interfaces, …
10:44 Ticket #322 (Improve mutability of Datasets) reopened by bdezonia
10:43 Ticket #305 (Eliminate all classes in ij1-patches) closed by bdezonia
wontfix: Wayne will not be incoporating our changes into 1.x. We will shrink …
10:41 Ticket #322 (Improve mutability of Datasets) closed by bdezonia
fixed: The Dataset code is being retired. This ticket can go away.
10:40 Ticket #273 (Investigate feasability of general iterators in imagej package) closed by bdezonia
fixed: The ideas for this code have been implemented in imglib-ops at this point. …
10:39 Ticket #161 (Maven: better Eclipse project metadata) closed by curtis
wontfix: It would be nice to eventually distribute some shared Eclipse …
10:38 Ticket #323 (Port ImglibProcessor functional interface) closed by bdezonia
fixed: During the hackathon the functional interface was pulled into imglib as …
10:23 Ticket #151 (Investigate ways to improve LOCI Java services functionality) closed by curtis
wontfix: Unfortunately, I do not have time to improve Bio-Formats's services …
10:17 Ticket #200 (Clean up autogen package) closed by curtis
wontfix: Josh Moore has volunteered to take over maintenance of the Bio-Formats …
10:15 Ticket #300 (Upload bf-cpp and bf-itk binary builds) closed by curtis
fixed: Mark has done this.
10:13 Ticket #159 (Maven: eliminate scan-deps.pl script) closed by curtis
fixed: The dependency:analyze target is sufficient. However, the OME team has …
09:38 Ticket #157 (Maven: migrate Bio-Formats command line tools) closed by curtis
wontfix: The OME team has opted to not use Maven for Bio-Formats, so this task is …
09:37 Ticket #156 (Maven: create assemblies for loci_tools.jar and ome_tools.jar) closed by curtis
fixed: This is done in the Bio-Formats maven branch. However, the OME team has …
09:37 Ticket #155 (Maven: get TestNG-based unit tests working) closed by curtis
wontfix: The OME team has opted to not use Maven for Bio-Formats, so this task is …
09:36 Ticket #296 (Configure Hudson to email committers who broke the build) closed by curtis
fixed: To email the committer who broke the build, I believe that person must …
09:35 Ticket #201 (Merge maven branch to trunk) closed by curtis
fixed: Bio-Formats was migrated out of the LOCI Software SVN repository. For the …
09:34 Ticket #158 (Maven: resolve filtering issues) closed by curtis
wontfix: The OME team has opted to not use Maven for Bio-Formats, so this task is …
09:33 Ticket #40 (Support for non-rectilinear coordinate systems) closed by curtis
fixed: The ImgLib2 design can accommodate functional transforms between …
09:30 Ticket #6 (Flesh out ImageJ 2.0 class hierarchy) closed by curtis
fixed: The design has come a long way, with many of the issues above sorted. The …


18:40 Ticket #338 (Work with Curtis on Plugin/Module IJ2 interfaces) created by aivar
Create an intermediate interface for IJ2 modules that provides lists of …
18:22 Ticket #302 (Investigate plugin chaining schemes) closed by aivar
fixed: The MULTIINSTANCE version of the workflow became a new project: …
13:48 Ticket #314 (Back the WorkFlowPipes plugin with Aivar's workflow Code) closed by rlentz
fixed: See the backed source code for the latest version at: …


00:00 Milestone progress-report completed
Milestone for project progress report.


23:00 Milestone biweekly-2011: Jan-31 to Feb-11 completed
Tasks from 2011-Jan-31 through 2011-Feb-11.
16:46 Ticket #337 (Find ImageJ bug that causes BioFormats ImporterTest to fail) created by bdezonia
At the hackathon Curtis found that BF's ImporterTest was failing for …
15:43 Ticket #336 (Continue work on revision 3 of imglib-ops) created by bdezonia
Rev 2 of AssignOperation code is in the imglib-ops subproject of Imglib. …
15:28 Ticket #335 (Hackathon work) closed by bdezonia
15:25 Ticket #335 (Hackathon work) created by bdezonia
Presentation on Dataset interface Presentation on AssignOperation Learning …


12:20 Ticket #294 (Email OME developers with thoughts, and request for feedback) closed by afraser
12:20 Ticket #291 (Query data via the OMERO Python API) closed by afraser


23:00 Milestone biweekly-2011: Jan-17 to Jan-28 completed
Tasks from 2011-Jan-17 through 2011-Jan-28.
14:17 Ticket #334 (Hackathon presentation preparation) closed by bdezonia
14:17 Ticket #334 (Hackathon presentation preparation) created by bdezonia
Prepare separate presentations for Dataset code and functional data …
14:12 Ticket #333 (Implement PrimitiveDatasetCreatorTest) closed by bdezonia
14:12 Ticket #333 (Implement PrimitiveDatasetCreatorTest) created by bdezonia
14:10 Ticket #324 (Write tests for DatasetProcessor) closed by bdezonia
fixed: finished writing basic tests


11:51 Ticket #321 (ImageJ OpenCL plugin support) closed by rlentz


12:15 Ticket #243 (Add Bio-Formats-Supported Files to Open dialog) closed by hinerm
fixed: Created a java class, BioFormatsExtensionPrinter, as part of the BF-CPP …


15:59 Ticket #332 (Improve WorkFlowPipes preview behavior) created by rlentz
Currently workflowpipe makes an Ajax call to get the preview results on a …


11:57 Ticket #331 (Check on License of imagine) created by gharris
Check licensing issues with imagine project
10:53 Ticket #330 (Example Extension for Envisaje Platform) created by gharris
Example Extension to demonstrate development of NetBeans Platform module …
10:51 Ticket #329 (Example Plugin for Envisaje) created by gharris
Example Plugin for Envisaje that demonstrates how to code and build a …
10:50 Ticket #328 (Commit Envisaje to SVN repository) created by gharris
Commit initial code/modules of Envisaje to SVN repository
10:45 Ticket #327 (Image Opener) created by gharris
Add image opener - using Bio-Formats to open into NavigableImagePanel.
10:43 Ticket #326 (Recent Files Menu) closed by gharris
10:42 Ticket #326 (Recent Files Menu) created by gharris
Added dynamic Recently Used File menu on File menu.
10:40 Ticket #138 (IJ Menus & Commands Refactoring) closed by gharris
10:40 Ticket #325 (IJ1 Plugins Installer for Envisaje) created by gharris
Installer for IJ1 Plugins to add them into Envisaje menus.
10:32 Ticket #120 (Prototype App. on NetBeans Platform) closed by gharris
fixed: Completed adaptation of net.java.dev.imagine project - changed package …
10:27 Ticket #289 (Update imagejdev.org with more technical details) closed by curtis
fixed: Web site was updated substantially over winter break. There is still …
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