Ticket #473 (closed defect: fixed)

Opened 9 years ago

Last modified 9 years ago

Image Calculator throws exception

Reported by: bdezonia Owned by: bdezonia
Priority: major Milestone: imagej-2.0-alpha2
Component: ImgLib2 Version:
Severity: serious Keywords:
Cc: Blocked By:
Blocking:

Description

Open bridge image. Use Process :: Image Calculator to try and make an image composed of adding bridge with itself. Code bombs out (in Imglib):

Exception in thread "PluginRunner-imagej.core.plugins.assign.ImageMath" java.lang.IndexOutOfBoundsException: Index: 1, Size: 1

at java.util.ArrayList.RangeCheck(ArrayList.java:547)
at java.util.ArrayList.get(ArrayList.java:322)
at net.imglib2.img.planar.PlanarImg.update(PlanarImg.java:133)
at net.imglib2.img.planar.PlanarImg.update(PlanarImg.java:1)
at net.imglib2.type.numeric.integer.GenericByteType.updateContainer(GenericByteType.java:70)
at net.imglib2.img.planar.PlanarRandomAccess.setPosition(PlanarRandomAccess.java:227)
at net.imglib2.ops.operation.RegionCursor.next(RegionCursor.java:77)
at net.imglib2.ops.operation.MultiImageIterator.next(MultiImageIterator.java:76)
at net.imglib2.ops.operation.AssignOperation.execute(AssignOperation.java:199)
at imagej.core.plugins.assign.NAryOperation.run(NAryOperation.java:184)
at imagej.core.plugins.assign.ImageMath.run(ImageMath.java:146)
at imagej.plugin.PluginRunner.run(PluginRunner.java:81)
at imagej.plugin.PluginManager$1.run(PluginManager.java:128)
at java.lang.Thread.run(Thread.java:680)

Change History

comment:1 Changed 9 years ago by bdezonia

  • Status changed from new to closed
  • Resolution set to fixed

fixed in OPS. RegionCursor.next() was setting the underlying RandomAccess' position out of bounds.

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