Ticket #341 (closed task: fixed)

Opened 9 years ago

Last modified 9 years ago

Fix/enhance Imglib 2.0 for use by ImageJ 2

Reported by: bdezonia Owned by: bdezonia
Priority: major Milestone: biweekly-2011: Apr-11 to Apr-22
Component: ImgLib2 Version:
Severity: serious Keywords:
Cc: Blocked By:


Imglib2 will be pulled into the core of IJ2. It needs some work for that to happen:

  • it currently has compile errors
  • it does not have dimensional labels
  • it does not have metadata
  • it does not label axes with units
  • it does not support functionality like ImageStack::addSlice()

Address these as needed to get to where we can intergrate the Img interface in Imglib2 into IJ2.

Change History

comment:1 Changed 9 years ago by bdezonia

  • Status changed from new to accepted

comment:2 Changed 9 years ago by bdezonia

wating on Stephan to remove the compile errors. Once that's done Img can be the interface to Dataset. Dataset will containt an Img, metadata (including labels), and units.

comment:3 Changed 9 years ago by bdezonia

spent time learning the internals of imglib2

comment:4 Changed 9 years ago by bdezonia

  • Milestone changed from biweekly-2011: Mar-14 to Mar-25 to biweekly-2011: Mar-28 to Apr-08

comment:5 Changed 9 years ago by bdezonia

  • Status changed from accepted to closed
  • Resolution set to fixed

I think all that is left with this is to add units to ImageJ (or Imglib). Will close this and add a new ticket for that.

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