Ticket #17 (closed feature: fixed)

Opened 10 years ago

Last modified 7 years ago

Support for N-dimensional image data

Reported by: curtis Owned by: aivar
Priority: major Milestone: imagej2-b1-initial
Component: Data Model Version:
Severity: non-issue Keywords:
Cc: Blocked By: #18, #251, #308, #322
Blocking:

Description

The current version of ImageJ is aware of five dimensions: X, Y, Z, time and channel. We would like for ImageJ to provide N-dimensional data modeling, to accommodate additional dimensions; e.g.:

  • multiple types of channels simultaneously (e.g., emission wavelengths vs. excitation wavelengths)
  • lifetime decay histograms
  • cell polarization state (binary)
  • screen/plate/well organization for high-content screening
  • multi-field datasets

It should be possible to represent such data within imglib, but it would be nice to have at least one concrete example in code demonstrating how this should work.

Change History

comment:1 Changed 9 years ago by curtis

  • Status changed from new to closed
  • Resolution set to fixed

ImgLib is N-dimensional. The updated ImgLib2 design will incorporate dimensional axis labels and units, to differentiate between dimensions.

comment:2 Changed 7 years ago by curtis

  • Type changed from task to story

comment:3 Changed 7 years ago by curtis

  • Blocked By 18 added

comment:3 Changed 7 years ago by curtis

  • Summary changed from Verify N-dimensional data can be modeled to Support for N-dimensional image data

comment:4 Changed 7 years ago by curtis

  • Component changed from imglib to ij-data-model

comment:5 Changed 7 years ago by curtis

  • Blocked By 251 added

comment:6 Changed 7 years ago by curtis

  • Blocked By 308 added

comment:7 Changed 7 years ago by curtis

  • Blocked By 322 added

comment:8 Changed 7 years ago by curtis

  • Milestone changed from progress-report to imagej-2.0-beta1
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